CDS

Accession Number TCMCG007C11156
gbkey CDS
Protein Id XP_009126024.1
Location complement(join(2742585..2742728,2742814..2742925,2743058..2743227,2743329..2743481,2743589..2743727,2743810..2743898,2743978..2744532,2744636..2745288,2745379..2745633,2745749..2745876,2745971..2746122,2746207..2746400,2746492..2746527,2746603..2746678,2746754..2746890,2747148..2747433,2747517..2747684,2747764..2747862,2747942..2748131,2748221..2748418,2748641..2748717))
Gene LOC103850963
GeneID 103850963
Organism Brassica rapa

Protein

Length 1336aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009127776.3
Definition paired amphipathic helix protein Sin3-like 2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category B
Description Paired amphipathic helix protein Sin3-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11644        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04139        [VIEW IN KEGG]
ko04919        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
map04139        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
GOs GO:0000118        [VIEW IN EMBL-EBI]
GO:0000122        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGCGGATGAGAGATGACGTTTACTCATCTGGGTCTCAATTCAAACGCTCCTTTGGCTCTTCTCGACGCGAATCATATGTGCAGTCTCCAACGCCTGCAAGTGGTGGCACCGGAGGAGGAGGAGGGAGGATTGGTGATGGGGGAGTCAACTCTCAGAAACTGACAACCCATGATGCTTTGTCCTACTTGAAGGATGTTAAGGAGATGTTTCAAGATCAACGGGACAAATATGATATGTTCCTTGAGGTTATGAAAGACTTCAAGGCTCAAAGGACGGATACATCTGGTGTGATTGAACGAGTGAAGGAGTTGTTTAAGGGGCATAACAATTTGATTTTCGGGTTTAACACCTTTCTGCCTAAGGGATTTGAAATAACTCTTGATGATTTAGAAGAAGAAGAAGCTCCACCGAAGAAGACTGTTGAATTTGAAGAAGCTATAACGTTTGTAAATAAAATTAAGAAACGGTTCCAGCGCGATGAAGATGTCTATAAGTCTTTCTTGGAGATCTTAAATATGTATCGTAAGGATGATAAGGACATTACTGAGGTTTACAATGAGGTATCGACTCTTTTTGAGGACCACCCGGACTTGCTTGAAGAATTCACTAAGTTCTTGCCAGAGTCTTTGGCGCCTCATTCAGCTGCTCAGTTAATCCGGAGTCAGGCCCAACGGTATGATGACAGAGGATCAGGCCCTCCTGTTGTGCGTCGAATGATAACAGACAAGGATCGCCGCCCACGAGAAAGAGCTGTTGCTTCTAGGTGTGACCGTGATCAAAGTGTTGACCGTTCTGACCTTAATGATGATAAAGCAATGGTTAAGATGCACAGAGATCCGAGGAAACGAGTGGACAAGGAGAATAGAGAAAGGAGAAGCCGTGATTTGGACCATGGAGAAGCTGGCCAAGATAACTTGCACCATTTTCCAGAGAAAAGGAAGTCATCCAGAAAAACTGAGGAGTTTGAAGCTTATTCTGGTCATGCGTCACATTCTGAGAAAAACAATCTAAAAGGCATGTACAACCAAGCATTTGTGTTTTGTGAGAAAGTCAAGGAGAAATTATGCAGCCAAGATGATTATCAGACATTCTTGAAGTTTCTCAATCTTTTCAGCAGTGGAATTATCCACAGGAAAGAACTGCAGAATTTTGTTTCTGATCTGCTTGGAAAATTCCCTGATCTCATGGATGAGTTCAATCAGTTCTTCGAGCGTTGCGAGAGTACTGATAGTTTCCAGCACCTAGCTGGCGTTATGAGCAAAAAATCACTTAGCAGTGATGAACATTTGTCTAAGCCAATGAAGGCGGAGGAAAAAGAAAGAGATGACAAACGCGACCTTGAGGCTGCTAAGGAAAAGGAGCGTTCCAAGGAAAAGTACATGGAGAAATCTATTCAGGAGCTTGATCTATCTGAATGCGAGCGTTGCACTCCTAGCTACCGGCTCCTCCCTTCGGATTATCCAATACCTTCTGTGCGCCACAGACAGAAATCAGTAGCTGCTGTTCTAAATGATCACTGGGTTTCTGTCACCTCAGGAAGTGAAGACTCCTTTAAGCACATGCGCAGAAACCAATATGAAGAAAGCTTATTTAGATGTGAAGATGACAGATTTGAGTTGGATATGCTGTTGGAATCTGTGGGATCTGCTGCGAAAAGCGCAGAAGACTTGTTAAATACTATCATTGAGAAGAAAATAAGTTTTGAGGGCTCCTTCCAGGTTGAAGACCACTTCACAGCCCTAAATTTAAGATGCATAGAGAGACTTTATGGCGACCATGGTCTAGACGTGACAGACTTAATACGTAAGAATCCAGCCGCTGCACTTCCTGTGATTCTGACTCGTTTGAAGCAGAAACAAGATGAATGGACAAAGTGCCGTGAAGATTTTAATGTGGTCTGGAAGGATGTGTATGCAAAGAACCATTATAAATCACTTGATCACCGCAGCTTCTATTTTAAGCAGCAAGATTCTAAGAACTTCAGTGCAAAAGCGCTGGTGACTGAAATCAAGGACCTTAAAGAGAAGTCTCAGATAGAAGATGATGTTCCTCTGTCGATTTCTGCTGGTTACAGACAACCAATAGTTCCTCACTTCGAGTATGAATATTTCGATAGAACTATTCCTGAGGATCTATTCAAACTAGTCCAATTTTCGTGTGAGGAGATATGTTCTTCAAAAGAGCAGATCAGTAAAGTTCTGAGGCTCTGGAACAGTTTCCTGGAGTTGATGCTTGGTGTTCCACCCAGGGCCAAGGGGTCAGATTCTGTTGAAGATGTTGCAGAAACCAAGCATCCCGTTACGAATGGGGAGGCTAATGTGAGTTCTGACGCTGTAAGTTTGGTTTCAAGGCAACTAAAATTTGCTGCCAATGGAGATGAGTATGCTTCATCTGGGGTCTCCAAACACGCCGGGGATGGTTTGTTGAACAGAGATTCTTCAGCAAAAGAAAATTGTAAGGATGTTGATCAGGCTAGTAAAGATGCTGCCACCTGTTCTGCTGTTAAACCCCAGAAAGATCTTGAAATTGGAAATGGAGCTAATAAAAGATCCGGAGATGATGAAAGAGTAGCCATTACAAGTGCATCATTCCCAAGTGGAGTAGAAAACAAGAATGATAACATTGATGCCATTCAGCGTACCCAGGTTGGTGATATTGGTAGAACTATAGCTATAGCAAATGGAGTGCAGCCAGATACTTCTAAAGCCAGCAGTAATCAAGATGAATCCGGTAGTCCATCCAAAATCGAGAAGGAGGAAGGTGAATTGTCACCTATTGGTGATTCCGGAGACAACTATGTTGTTCATGAAGAGCGTGGACTGAAGTCTACTGCCAAATCAGAACATTCCATTGAAGCTGTAGGAGAAAATGATGATGATGAAGCTGACGATGAGGATGGTGATGATGCTTCCGAAGGTGGCGAGGACGCTTCGGGAACTGAATCCGTTGGTGACGAGTGTTCACAGGAAGATAATGGTGTGGAGGAAGAGGGTGAGGATGTTAAAGCTGAAAGCGAAGGAGAGGCAGAGGGTATGGAGTCGCATCTTATAGAAGACAGTGGGTCGCTTCCATTGTCAGAACGTGTTCTGTTATCCGTTAAGCCTCTTTCAAAGCGTGTAGCTGCAGCGGATGAAAGAAAACAAGATTCCAGAGTTTTCTATGGGAATGACGACTTTTATGTTCTTTTCAGGCTTCATCGAATACTGTACGAGAGAATTTCCTCTGCAAAGACATATTGCAATCGGAGAAACACGAAAGATTCTACTAGTTCACCAGATCCTTATGCAAGGTTTATGAGTGCTCTGTTTAGTCTGCTTAATGGCTCAGCTGAAAGCTCCAAATTTGAGGATGAGTGCCGAGCTATCATTGGAAACCAATCATATGTTTTATTCACCTTGGAGAAACTTATATACAAATTGGTTAAACATCTTCAAGCTATCGTAGCGGACGATACTGACAACAAGCTTCTTCAATTGTATGAGTATGAGGAATCTCGGAAACCTGATAGGGTCATTGACTCAGTGTATTATGAAAACGCCAGGATCCTCCTTCACGAGGAAAACATTTACCGGCTGGAATGTTCGTCCTCTCCTCCTCGTTTGTCAATCCAGCTTATGGATAATATAATGGAAAAGCCTGAGGCGTATGCAGTTTCCATGGAACCCACTTTTGCAAGTTATCTGCAAAAGGAGTTTCTTTCCAACTCCTCATCAGGGAGAAAAACAGCGCTACAGCCAATTGTGTTACAAAGGAACATGCGTGGATACTCTGGTCTGGATGATCTTGCAGTAGCTTGCAAGGCAATGGAAGGTGTAAAAGTAATCAATGGCCTTGAGTGCAAGATGTCTTGCTCTTCCTACAAGATTTCGTATGTTTTGGACACGGAAGATTACTTCCACAGGAAGAAGCATAAGAAGAGTGATGACTTGTCACAAGACAAATCATCGCAGAAACGCAAGTTGAATAGAGTAGAAAGATTCCATAGCTTTCTTTCAGCTTCAAGATGA
Protein:  
MKRMRDDVYSSGSQFKRSFGSSRRESYVQSPTPASGGTGGGGGRIGDGGVNSQKLTTHDALSYLKDVKEMFQDQRDKYDMFLEVMKDFKAQRTDTSGVIERVKELFKGHNNLIFGFNTFLPKGFEITLDDLEEEEAPPKKTVEFEEAITFVNKIKKRFQRDEDVYKSFLEILNMYRKDDKDITEVYNEVSTLFEDHPDLLEEFTKFLPESLAPHSAAQLIRSQAQRYDDRGSGPPVVRRMITDKDRRPRERAVASRCDRDQSVDRSDLNDDKAMVKMHRDPRKRVDKENRERRSRDLDHGEAGQDNLHHFPEKRKSSRKTEEFEAYSGHASHSEKNNLKGMYNQAFVFCEKVKEKLCSQDDYQTFLKFLNLFSSGIIHRKELQNFVSDLLGKFPDLMDEFNQFFERCESTDSFQHLAGVMSKKSLSSDEHLSKPMKAEEKERDDKRDLEAAKEKERSKEKYMEKSIQELDLSECERCTPSYRLLPSDYPIPSVRHRQKSVAAVLNDHWVSVTSGSEDSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSAEDLLNTIIEKKISFEGSFQVEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEWTKCREDFNVVWKDVYAKNHYKSLDHRSFYFKQQDSKNFSAKALVTEIKDLKEKSQIEDDVPLSISAGYRQPIVPHFEYEYFDRTIPEDLFKLVQFSCEEICSSKEQISKVLRLWNSFLELMLGVPPRAKGSDSVEDVAETKHPVTNGEANVSSDAVSLVSRQLKFAANGDEYASSGVSKHAGDGLLNRDSSAKENCKDVDQASKDAATCSAVKPQKDLEIGNGANKRSGDDERVAITSASFPSGVENKNDNIDAIQRTQVGDIGRTIAIANGVQPDTSKASSNQDESGSPSKIEKEEGELSPIGDSGDNYVVHEERGLKSTAKSEHSIEAVGENDDDEADDEDGDDASEGGEDASGTESVGDECSQEDNGVEEEGEDVKAESEGEAEGMESHLIEDSGSLPLSERVLLSVKPLSKRVAAADERKQDSRVFYGNDDFYVLFRLHRILYERISSAKTYCNRRNTKDSTSSPDPYARFMSALFSLLNGSAESSKFEDECRAIIGNQSYVLFTLEKLIYKLVKHLQAIVADDTDNKLLQLYEYEESRKPDRVIDSVYYENARILLHEENIYRLECSSSPPRLSIQLMDNIMEKPEAYAVSMEPTFASYLQKEFLSNSSSGRKTALQPIVLQRNMRGYSGLDDLAVACKAMEGVKVINGLECKMSCSSYKISYVLDTEDYFHRKKHKKSDDLSQDKSSQKRKLNRVERFHSFLSASR